Works Cited – Consider the Platypus

· Green RE, Krause J, Briggs AW, et al. (May 2010). “A draft sequence of the Neandertal genome” (PDF). Science. 328 (5979): 710–722. doi:10.1126/science.1188021. PMID 20448178.

· The Neanderthal in Us

· “Neandertal DNA may raise risk for some modern human diseases”. Science News

· Zimmer, Carl (18 December 2013). “Toe Fossil Provides Complete Neanderthal Genome”. New York Times.

· Prüfer, Kay; et al. (18 December 2013). “The complete genome sequence of a Neanderthal from the Altai Mountains”. Nature. 505: 43–49. Bibcode:2014Natur.505…43P. doi:10.1038/nature12886. PMC 4031459 Freely accessible. PMID 24352235.

· “Scientists Decode Majority of Neanderthal Man’s Genome”. Deutsche Welle. 13 February 2009.

· McGroarty, Patrick (12 February 2009). “Team in Germany maps Neanderthal genome”. The Associated Press.

· Wade, Nicholas (12 February 2009). “Scientists in Germany Draft Neanderthal Genome”. The New York Times.

· Inman, Mason (12 February 2009). “Neanderthal Genome “First Draft” Unveiled”. National Geographic News.

“Draft full sequence of Neanderthal Genome”. Science Mag. 7 May 2010.

· Wade, Nicholas (6 May 2010). “Signs of Neanderthals Mating With Humans”. The New York Times.

· Than, Ker (6 May 2010). “Neanderthals, Humans Interbred—First Solid DNA Evidence”. National Geographic Society.

· Cohen, Jon (29 June 2007). “Relative Differences: The Myth of 1%” (PDF). AAAS.

· https://genographic.nationalgeographic.com/neanderthals-article/

· “Humans and Chimps: Close But Not That Close”. Scientific American.

· Wong, Kate (1 September 2014). “Tiny Genetic Differences between Humans and Other Primates Pervade the Genome”. Scientific American.

· Gibbons, Ann (13 June 2012). “Bonobos Join Chimps as Closest Human Relatives”. Science/AAAS.

· Brown, David (March 25, 2010). “DNA from bone shows new human forerunner, and raises array of questions”. Washington Post.

· Krause J, Fu Q, Good JM, et al. (April 2010). “The complete mitochondrial DNA genome of an unknown hominin from southern Siberia”. Nature. 464 (7290): 894–897. doi:10.1038/nature08976. PMID 20336068.

· Igor V. Ovchinnikov; Anders Götherström; Galina P. Romanova; Vitaliy M. Kharitonov; Kerstin

· Lidén; William Goodwin (30 March 2000). “Molecular analysis of Neanderthal DNA from the northern Caucasus”. Letters to Nature. Nature 404. pp. 490–493. doi:10.1038/35006625.

· Skull discovery suggests location where humans first had sex with Neanderthals The Guardian, 28 January 2015

· Vernot et al. Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals. Science 08 Apr 2016: Vol. 352, Issue 6282, pp. 235-239 DOI: 10.1126/science.aad9416

· https://www.genome.gov/27539119/2010-release-complete-neanderthal-genome-sequenced/ (2010)

· Svante Pääbo –https://www.youtube.com/watch?v=y3ltrLtzcLM https://news.nationalgeographic.com/news/2014/01/140129-neanderthal-genes-genetics-migration-africa-eurasian-science/

· https://www.mpg.de/11533845/neandertal-dna

· Genomic DNA” (PDF). Science. 314 (5802): 1113–1118. doi:10.1126/science.1131412. PMC 2583069 PMID 17110569.

· Timmer, John (2006-11-17). “Welcome to Neanderthal genomics”.

· Krause J, Lalueza-Fox C, Orlando L, et al. (November 2007). “The derived FOXP2 variant of modern humans was shared with Neandertals“. Current Biol. 17 (21): 1908–1912. doi:10.1016/j.cub.2007.10.008. PMID 17949978.

· Green, Richard E.; et al. (2008-08-08). “A Complete Neandertal Mitochondrial Genome Sequence Determined by High-Throughput Sequencing” (PDF). Cell. Elsevier. 134 (3): 416–426. doi:10.1016/j.cell.2008.06.021. PMC 2602844 Freely accessible. PMID 18692465.

· Neanderthal genome project on National Public Radio

· “Genetic algorithm model shows that modern humans out-competed the Neanderthal” 2008

Clovis (not really discussed)

· https://www.earthmagazine.org/article/down-earth-molecular-biologist-sarah-l-anzick

· http://science.sciencemag.org/content/331/6024/1599

Dolphin

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3415902/

· https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0065491

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5592193/

· http://www.pnas.org/content/114/30/7814

· https://evolution.berkeley.edu/evolibrary/article/evograms_03

· https://www.semanticscholar.org/paper/A-phylogenetic-blueprint-for-a-modern-whale.-GatesyGeisler/d75ca102da15495d2649d346e05787d8a0348841/figure/10

· https://www.nature.com/articles/ncomms3708

Brain:

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4635206/

· https://www.npr.org/sections/thetwo-way/2018/02/28/589327979/listen-dolphins-use-targeted-echolocation-to-plan-their-hunting-dives

· https://phys.org/news/2018-09-dolphins-forrewards.html

· https://www.wsws.org/en/articles/2017/12/12/ceta-d12.html

Prehistoric background:

· https://academic.oup.com/mbe/article/35/8/2026/5017252

Crow

· New tandem genome analysis approach:https://www.pacb.com/blog/crow-genome-analysis-combines-assemblies-spot-tandem-arrays/ Actual study:https://genome.cshlp.org/content/early/2017/03/30/gr.215095.116.abstract

On keeping it diverse:

· http://science.sciencemag.org/content/344/6190/1410

· https://www.nature.com/articles/ncomms13195

Intelligence:

· https://phys.org/news/2018-01-caledonian-crows-prey-faster-complex.html

· https://science.sciencemag.org/content/297/5583/98 1

· https://corvidresearch.blog/2017/01/05/the-rarest-crow/

· https://corvidresearch.blog/2015/06/11/counting-crows/

· https://www.nature.com/articles/ncomms13195

· https://www.ncbi.nlm.nih.gov/pubmed/25868525

· https://www.nature.com/articles/s41598-018-27405-1?WT.ec_id=SREP-20180703&spMailingID=56924831&spUserID=MzE3MTQ4MjI0MDYS1&spJobID=1440302364&spReportId=MTQ0MDMwMjM2NAS2

· http://www.pnas.org/content/113/26/7255.short

· https://corvidresearch.blog/2014/06/27/reaching-the-limits-of-crow-intelligence/

· https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1558-5646.2009.00854.x (Parenting)

Whiptail Lizard

· http://www.bioone.org/doi/abs/10.3099/MCZ17.1

· https://www.nytimes.com/2014/12/18/science/strange-tale-of-new-species-of-lizard.html

· http://blogs.discovermagazine.com/notrocketscience/2010/02/21/extra-chromosomes-allow-all-female-lizards-to-reproduce-without-males/#.W9fLiXpKh0s

· https://whyevolutionistrue.wordpress.com/2010/11/19/hybridization-and-parthenogenesis-in-whiptail-lizards/

· https://www.scientificamerican.com/article/asexual-lizards/

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5201048/

· Background on sex chromosomeshttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3880147/

· Reptile Pregnancyhttps://academic.oup.com/gbe/article/8/10/3226/2939566

Hoatzin

(See also Chicken for general bird boom stuff)

· https://www.scientificamerican.com/article/how-dinosaurs-shrank-and-became-birds/

· http://avian.genomics.cn/en/index.html

· https://b10k.genomics.cn/progress.html

· https://nhm.org/site/research-collections/dinosaur-institute/dinosaurs/birds-late-evolution-dinosaurs

· https://evolution.berkeley.edu/evolibrary/article/evograms_06

· https://onlinelibrary.wiley.com/doi/full/10.1111/zsc.12213

· http://science.sciencemag.org/content/346/6215/1275

· History of hoatzin’s confusing background:https://academic.oup.com/mbe/article/20/9/1484/976867 https://www.ncbi.nlm.nih.gov/pubmed/10486983

https://www.sciencedirect.com/science/article/pii/S1055790384710190

· Originated in Europe (don’t really mention)https://www.sciencedaily.com/releases/2014/01/140122091738.htm https://evolutionnews.org/2011/11/the_case_of_the_mysterious_hoa/

· https://www.audubon.org/news/hoatzin

· https://www.britannica.com/animal/hoatzin

· Stomach:https://academic.oup.com/mbe/article/11/6/921/1066821

African Malaria Mosquito

· https://onlinelibrary.wiley.com/doi/abs/10.1111/evo.12281

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2805638/

· http://science.sciencemag.org/content/347/6217/1258522

· https://www.sciencedirect.com/science/article/pii/S1471492217302684

· CRISPRhttps://www.genengnews.com/gen-news-highlights/crispr-use-creates-malaria-resistant-mosquitoes/81255570

· Evolving to drink blood:http://www.pnas.org/content/115/5/1009

Olfactory senses:

· https://academic.oup.com/chemse/article/29/5/403/368326

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4286346/

Dog

· https://www.theatlantic.com/science/archive/2016/06/the-origin-of-dogs/484976/

· http://science.sciencemag.org/content/342/6160/871

· https://www.kth.se/en/forskning/artiklar/konflikt-om-hundens-fodelseplats-1.614048

· https://www.ncbi.nlm.nih.gov/pubmed/17026926

Neural Crest:

· http://www.genetics.org/content/197/3/795

· https://www.ncbi.nlm.nih.gov/pubmed/9050057

· https://genome.cshlp.org/content/15/12/1706.full

· https://www.pbs.org/wgbh/evolution/library/01/5/l_015_02.html

· https://www.nature.com/articles/nature04338

Breeds

· http://www.sciencemag.org/news/2017/04/where-did-your-dog-come-new-tree-breeds-may-hold-answer

· https://www.sciencedirect.com/science/article/pii/S0168952507003058

· https://www.sciencedirect.com/science/article/pii/S2211124717304564

· https://www.sciencedirect.com/science/article/pii/B9780124078185000012

· https://www.popsci.com/dog-breed-evolution-map

Village dog studyhttps://bmcbiol.biomedcentral.com/articles/10.1186/s12915-018-0535-2

As relates to humans:

· https://www.sciencedirect.com/science/article/pii/S2352409X16303157?via%3Dihub

· https://www.sciencedirect.com/science/article/pii/S0305440318300049

· http://science.sciencemag.org/content/361/6397/81 https://www.nationalgeographic.com/science/2018/07/news-ancient-dog-breed-dna-koster-ctvt/?user.testname=none

· https://www.nature.com/articles/d41586-018-05645-5?utm_source=briefing-dy&utm_medium=email&utm_campaign=briefing&utm_content=20180706

· https://www.nature.com/articles/ncomms2814

· https://www.forbes.com/sites/grrlscientist/2017/04/25/old-dog-new-dog-genetic-map-tracks-the-evolution-of-mans-best-friend/#3a86bfe8ec77

Colorblindness

· https://www.psychologytoday.com/us/blog/canine-corner/200810/can-dogs-see-colors

Evolution of wolves:

· https://thearcticwolfblog.wordpress.com/evolutionary-history/

Hearing and Olfactory ability of wolves:

· https://books.google.com/books?hl=en&lr=&id=KOQZrXvczGMC&oi=fnd&pg=PT5&dq=wolf+hearing+%22miles+away%22&ots=rU-yPVvVT8&sig=cf6Ba8a1ZajpOCEekISXz452PHw#v=onepage&q=%22miles%20away%22&f=false

Cat

· Phylo treehttp://mambobob-raptorsnest.blogspot.com/2012/07/cat-skull-shape-evolution-across.html

· Story of Carlos in Lion in the Living Room by Abigail Tuckerhttps://books.google.com/books?id=2iozDwAAQBAJ&printsec=frontcover&dq=lion+in+the+living+room&hl=en&sa=X&ved=0ahUKEwjY_KaaqKzeAhWJy4MKHRt3D_IQ6AEIKjAA#v=onepage&q=lion%20in%20the%20living%20room&f=false

· Carlos’ mtDNAhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3157884/

· https://www.nature.com/news/2007/071031/full/news.2007.208.html

· https://genome.cshlp.org/content/17/11/1675.full

· 2014 (comparative with diagram)http://www.pnas.org/content/pnas/111/48/17230/F1.large.jpg

· 2014https://gigascience.biomedcentral.com/articles/10.1186/2047-217X-3-13

· 2017http://www.sciencemag.org/news/2017/06/ancient-egyptians-may-have-given-cats-personality-conquer-world

· 2017https://www.nature.com/articles/s41559-017-0139

· 2008https://www.sciencedirect.com/science/article/pii/S0888754308002735

· GARfieldhttp://garfield.dobzhanskycenter.org/

· Near Easternhttps://www.ncbi.nlm.nih.gov/pubmed/17600185

· Teethhttp://mambobob-raptorsnest.blogspot.com/2012/07/cat-skull-shape-evolution-across.html

· Teethhttp://www.sci-news.com/paleontology/evolutionary-history-saber-toothed-cats-05345.html

· https://www.apnews.com/01781fa9320140629a4d1c88f2f27ba7

· Comparative odorant and chemical detection abilities between cats and dogs, brains, hunting behavior, Montegue et alhttp://www.pnas.org/content/111/48/17230.abstract

· http://genome.cshlp.org/site/press/CatGenomeSequence.xhtml

· 2007https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2045150/

· 99 cats https://www.nature.com/news/i-can-haz-genomes-cats-claw-their-way-into-genetics-1.16708

· Douglas Harper, Online Etymology Dictionary, s.v. “cat”

· John Huehnergard, Qitta: Arabic Cats, in Classical Arabic Humanities in Their Own Term

· Jean-Paul Savignac, Dictionnaire français-gaulois, s.v. “chat” (Paris: Errance, 2004), 82

· Kroonen, Guus (2013), “*kattōn-”, in Etymological Dictionary of Proto-Germanic (Leiden Indo-European Etymologica

· Dictionary Series; 11), Leiden, Boston: Brill

· Chinese “Cat” words https://ninchanese.com/blog/2015/05/15/5-chinese-words-you-didnt-expect-to-see-a-cat-in/

· Chittock, Lorraine: Cats of Cairo: Egypt’s Enduring Legacy. Introduction by Annemarie Schimmel. New Yor: Abbeville Press, 2001.

· http://muslimheritage.com/article/cats-islamic-culture#ftn104

· http://referenceworks.brillonline.com/search?s.q=cats&s.f.s2_parent=s.f.book.encyclopaedia-of-islam-2&search-go=Search

· Darwin on cat feelings https://biblioklept.org/2015/02/12/on-the-special-expressions-of-cats-charles-darwin/

· http://www.sciencemag.org/news/2004/04/early-origin-purrfect-pet

· http://www.iucnredlist.org/details/60354712/0

· https://www.revolvy.com/main/index.php?s=Johann%20Christian%20Daniel%20von%20Schreber

· http://onlinelibrary.wiley.com/doi/10.1002/oa.913/full

· http://www.sciencedirect.com/science/article/pii/S0888754308002735

· https://gigascience.biomedcentral.com/articles/10.1186/2047-217X-3-13

· https://www.sciencedirect.com/science/article/pii/S0305440314000636

· https://www.google.com/search?q=Engels%2C+D.+W.+Classical+Cats%3A+The+Rise+and+Fall+of+the+Sacred+Cat+(Routledge%2C+2001).&oq=Engels%2C+D.+W.+Classical+Cats%3A+The+Rise+and+Fall+of+the+Sacred+Cat+(Routledge%2C+2001).&aqs=chrome..69i57.1460j0j7&sourceid=chrome&ie=UTF-8

Fruit Fly

· (1988) cit 1391http://www.genetics.org/content/genetics/118/3/461.full.pdf

· Fly genome Book (1992)https://books.google.com/books?hl=en&lr=&id=sklm5UmoGykC&oi=fnd&pg=PP1&dq=drosophila+fly+genome&ots=g54bVnmy_S&sig=MS2tCefCA9gNVfAgKRBo-IMDNsQ#v=onepage&q=drosophila%20fly%20genome&f=false

· (2000)http://science.sciencemag.org/content/287/5461/2185

· (2004)https://www.nature.com/articles/ng1312

· (2004) cit 751 http://science.sciencemag.org/content/303/5659/832

· (2012)http://www.tandfonline.com/doi/abs/10.4161/fly.19695

· (2007) 1181 cithttps://www.nature.com/articles/ng2049

· Deep Homology: Uncanny Similarities of Humans and Flies Uncovered by Evo-Devo by Lewis I. Held, Jr.

· https://news.uchicago.edu/article/2017/01/19/scientists-engineer-fruit-flies-ancient-genes-test-causes-evolution

· https://www.nature.com/articles/ng1086

· Evo Devo and clocks:http://bit.ly/2EpoZql

· MEGA (Tamura)

· MEGA Hawaiihttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3472498/

Morgan

· Primary Source:https://books.google.com/books?hl=en&lr=&id=6DQPAAAAYAAJ&oi=fnd&pg=PA1&dq=evolution+and+adaptation+1903+morgan&ots=jJc1p0I-cB&sig=bBLuCDMt8YWB5DPakxWes5IiZh4#v=onepage&q=evolution%20and%20adaptation%201903%20morgan&f=false

· https://books.google.com/books?id=ghBziE-HefMC&printsec=frontcover&dq=Evolution.+The+First+Four+Billion+Years.+Harvard+University+Press.&hl=en&sa=X&ved=0ahUKEwig0pTB9fHYAhXh6oMKHaK5AfsQ6AEIKTAA#v=onepage&q=melanogaster&f=false

· https://books.google.com/books?id=lZZAAQAAMAAJ&pg=PA677&lpg=PA677&dq=%22I+think+we+shall+be+justified+in+rejecting+it+as+an+explanation+of+the+secondary+sexual+differences+amongst+animals%22,&source=bl&ots=JiVHXEDhkt&sig=nW_C6Uz_PWwCscTinj4pcA_Krck&hl=en&sa=X&ved=0ahUKEwiC55vo9PHYAhUk2IMKHQyEDEQQ6AEIPDAC#v=onepage&q=%22I%20think%20we%20shall%20be%20justified%20in%20rejecting%20it%20as%20an%20explanation%20of%20the%20secondary%20sexual%20differences%20amongst%20animals%22%2C&f=false

· http://www.genomenewsnetwork.org/resources/timeline/1910_Morgan.php

· https://www.revolvy.com/main/index.php?s=Thomas%20Hunt%20Morgan&item_type=topic

· Eye, Myosin (Life Ascending Nick Lane, 2009, mentioned elsewhere)

· Pheromoneshttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3939894/

· Endler fly experiment Improb… Losos:https://books.google.com/books?id=1TynDQAAQBAJ&printsec=frontcover&dq=improbable+destinies&hl=en&sa=X&ved=0ahUKEwjDu7n32vHYAhWN2YMKHdM4CZYQ6AEIKTAA#v=onepage&q=the%20different%20selection%20fornces%20acting%20on%20the&f=false

· Wings (soft source):https://www.theverge.com/2018/1/18/16905238/evolutionary-development-insect-wings-dual-origin-hypothesis, in (hard) Wing Dual Origin (Spanish–make sure to check that I’m referencing the same article, not two):http://www.cell.com/current-biology/fulltext/S0960-9822(17)31468-9

· Aggression/Head butting –https://www.ncbi.nlm.nih.gov/pmc/articles/PMC122828/ (+ also check out bonus citation about females…?)

· Neur disease:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC311089/

· Geo origins – Mosaic ancestry, JE Pool 2015https://www.ncbi.nlm.nih.gov/pubmed/26354524) REV

· Lane, Nick. Ten Great Inventions of Evolution

· Circadiahttps://www.ncbi.nlm.nih.gov/pubmed/2105471

· Clock mutationshttps://www.ncbi.nlm.nih.gov/pubmed/5002428

· Circadian Nobelhttps://whyevolutionistrue.wordpress.com/2017/10/02/matthew-gets-nobel-prize-prediction-right-four-years-too-early-and-a-contest/

· https://www.nature.com/articles/343536a0

· Heart comparehttps://www.ncbi.nlm.nih.gov/pubmed/22609364/

Alcohol

· https://pubs.niaaa.nih.gov/publications/arh24-3/185-188.pdf

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC122828/

· Stubblehttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC46628/

· Stubble OG (1969)

· Stubble (look again)https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1456279/

· Stubble recent, full explan http://www.pnas.org/content/pnas/90/11/4937.full.pdf

· Stubble in Balancer context (conntec to eye or nah?) http://www.pnas.org/content/pnas/90/11/4937.full.pdf

· William Blake “The Fly.” From Songs of Experience. First published in 1794, public domain.

McDonald-Kreitman Test

· https://arxiv.org/abs/1211.0060

· +http://evolutioniscomplicated.blogspot.com/2013/05/the-mcdonald-kreitman-test.html (led to above)

· +http://www.pnas.org/content/110/21/8615.abstract

· https://www.nature.com/articles/351652a0

· Drug testinghttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3082451/

· Heterochromatinhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2825053/

(Vent Shrimp – Primarily Life Ascending, listed elsewhere)

Great Barrier Reef Demosponge

· https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0001031

· https://academic.oup.com/mbe/article/24/2/363/1143771

· https://sites.google.com/site/animalbiologyspring2010/porifera/ecology

· (A lot about anatomy features from Tree of Life by Lecointre and Le Guyader, mentioned above)

· http://www.gbri.org.au/Species/Amphimedonqueenslandica.aspx?aid=74&PageContentID=2595

· https://appliedecology.cals.ncsu.edu/absci/2013/10/sponges-the-solution-to-darwins-coral-reef-paradox/

· Distribution, reproduction, digestion, skeletonhttps://books.google.com/books?id=S4LxB9MRdzMC&pg=PA201&lpg=PA201&dq=1)+siliceious+spicules+including+one+to+four+rays+and+(2)+Spongin:+special+type+of+collagen+that+is+either+dispersed+throughout+parenchyma+or+structured+into+large+fibers&source=bl&ots=TXeHVKc6ZX&sig=GTsFuXXAKXrwjsVhJrdhBXytSq0&hl=en&sa=X&ved=2ahUKEwjk6sS79uXdAhUD_IMKHd2sB5gQ6AEwAHoECAkQAQ#v=onepage&q=1)%20siliceious%20spicules%20including%20one%20to%20four%20rays%20and%20(2)%20Spongin%3A%20special%20type%20of%20collagen%20that%20is%20either%20dispersed%20throughout%20parenchyma%20or%20structured%20into%20large%20fibers&f=false

· Chitin:https://www.researchgate.net/publication/323159439_The_demosponge_Pseudoceratina_purpurea_as_a_new_source_of_fibrous_chitin

Other sponges, background

· https://www.biorxiv.org/content/early/2017/04/11/126326

Vs. Jellies:

· https://www.newyorker.com/tech/annals-of-technology/consider-the-sponge

· https://www.realclearscience.com/2017/03/26/which_came_first_sponges_or_comb_jellies_275407.html

Comb Jelly

· https://patch.com/connecticut/norwalk/the-comb-jelly-story-becomes-more-tangled (2013)

· https://news.nationalgeographic.com/news/2014/05/140521-comb-jelly-ctenophores-oldest-animal-family-tree-science/ (2014)

· https://www.cell.com/trends/ecology-evolution/fulltext/S0169-5347(15)00062-2

Lungfish

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869758/

· https://www.sciencedirect.com/science/article/pii/S0031018216304138

· https://www.nature.com/articles/srep21571

· https://www.ncbi.nlm.nih.gov/pubmed/22734051

· https://evolution.berkeley.edu/evolibrary/article/evograms_04

On evolution of tertrapods

· https://news.uchicago.edu/story/discovery-new-fossils-reveals-key-link-evolution-hind-limbs

· http://www.pnas.org/content/111/3/893.short

· https://evolution.berkeley.edu/evolibrary/article/evograms_04

· (Your Inner Fish by Neil Shubin:https://books.google.com/books?id=bk2PDQAAQBAJ&printsec=frontcover&dq=your+inner+fish+neil+shubin&hl=en&sa=X&ved=0ahUKEwiiwN7Q95zeAhUl_4MKHTBPBd4Q6AEIKTAA#v=onepage&q=your%20inner%20fish%20neil%20shubin&f=false)

· Immunityhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869758/

(See also “Fins to fingers in Zebrafish below**)

Coelacanth

· https://whyevolutionistrue.wordpress.com/2013/04/19/coelacanth-genome-sequenced/

· https://www.popsci.com/livingartifacts

· https://www.seriouslyfish.com/african-coelacanth-genome-sequenced/

· https://www.sciencedirect.com/science/article/pii/S0031018216304138 (2017 Evolutionary history of lungfishes with a new phylogeny of post-Devonian genera)

· https://www.sciencedirect.com/science/article/pii/S0031018216304138 (2017 new lungfish evo Evolutionary history of lungfishes with a new
phylogeny of post-Devonian genera)

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869758/ (2015-16 African lungfish Reveal the Evolutionary Origins
of Organized Mucosal Lymphoid Tissue in Vertebrates)

· https://www.nature.com/articles/nature12027 (2013, The African coelacanth genome provides insights
into tetrapod evolution)

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3633110/ )

· https://www.broadinstitute.org/coelacanth/coelacanth-genome-project

· http://coelacanth.nig.ac.jp/

· http://genome.cshlp.org/content/23/10/1740.full

· https://www.scientificamerican.com/article/slow-evolving-lobe-finned-coelacanth-genome-unlocked/

Zebrafish

· https://www.nature.com/articles/nature12111,https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3703927/

**Fins to fingers

· https://www.researchgate.net/figure/Simplified-phylogeny-of-teleost-fishes-The-teleost-lineage-splits-from-basal-ray-finned_fig1_264501345

· https://news.uchicago.edu/story/discovery-reveals-evolutionary-path-fins-fingers

· http://scifeeds.com/news/zebrafish-study-offers-insights-into-nerve-cell-repair-mechanisms/

· https://www.theatlantic.com/science/archive/2016/08/from-fins-to-feet/496226/

· http://www.nytimes.com/…/from-fins-into-hands-scientists-discover-a-deep-evolution%E2%80%A6

· http://www.sciencemag.org/news/2016/08/genes-linking-human-fingers-and-fish-fins-are-now-hand

· https://evodevojournal.biomedcentral.com/articles/10.1186/s13227-017-0084-8

Regeneration

· https://www.quantamagazine.org/axolotl-genome-slowly-yields-secrets-of-limb-regrowth-20180702/

· http://scifeeds.com/news/zebrafish-study-offers-insights-into-nerve-cell-repair-mechanisms/

African Clawed Frog (Xenopus)

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5715680/

· http://www.pnas.org/content/pnas/early/2017/06/26/1704632114.full.pdf

· http://news.berkeley.edu/2016/10/20/lab-frog-dna-shows-what-happens-when-genomes-collide/ (Polyploidy)

· https://www.sciencedaily.com/releases/2016/10/161019155533.htm (Polyploidy)

· https://www.ru.nl/english/news-agenda/news/vm/radboud-institute-molecular-life-sciences/2016/african-clawed-frog/ (Polyploidy)

· https://www.floridamuseum.ufl.edu/science/researchers-discover-six-new-african-clawed-frog-species-discovered/

· https://onlinelibrary.wiley.com/doi/abs/10.1002/ece3.3010

· https://www.nature.com/articles/nature19840

· https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0177087

· https://www.ncbi.nlm.nih.gov/gene/398000

· (Calls)https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978194/

Like humans:

· https://www.livescience.com/6379-frogs-surprisingly-humans-genetically-speaking.html

· https://www.theatlantic.com/science/archive/2017/05/how-a-frog-became-the-first-mainstream-pregnancy-test/525285/

Zebra Finch

· https://geogenetics.ku.dk/latest-news/alle_nyheder/2014/international-team-maps-big-bang-of-bird-evolution/

Red:

· https://www.natureasia.com/en/research/highlight/12626

· https://www.ncbi.nlm.nih.gov/pubmed/27212402

Extra chromosome:

· https://www.sciencedaily.com/releases/2018/05/180503142938.htm

· https://www.cell.com/current-biology/fulltext/S0960-9822(18)30425-1?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0960982218304251%3Fshowall%3Dtrue#back-bib1

“Speech”

· https://www.scientificamerican.com/article/massive-genetic-effort-confirms-bird-songs-related-to-human-speech/

Grey Short-Tailed Opossum

· http://phenomena.nationalgeographic.com/2014/12/24/the-opossums-tale/

· http://www.ucmp.berkeley.edu/mammal/multis/multis.html

· https://onlinelibrary.wiley.com/doi/full/10.1002/cne.24018

· https://www.livescience.com/6770-marsupials.html

· https://www.livescience.com/5196-scientists-map-kangaroo-dna.html

· https://www.sciencedaily.com/releases/2009/12/091215202320.htm

· https://www.nationalgeographic.com/science/phenomena/2007/05/09/did-grandma-have-a-pouch-and-other-thoughts-on-the-opossums-genome/?_ga=2.59726830.2134602151.1527988917-386330689.1517612590

· https://books.google.com/books?id=OBztA9R-T8AC&pg=PA157&lpg=PA157&dq=opossums+x+mechanism&source=bl&ots=n54VNDVUL8&sig=PpmciQxH-SnuMCQ8v3cNTqmUWio&hl=en&sa=X&ved=0ahUKEwjE-5C3lrjbAhXG8YMKHWnCBUIQ6AEIiQEwDg#v=onepage&q=opossums%20x%20mechanism&f=false

· https://www.wired.com/2007/05/opossum-provide/ ,https://news.harvard.edu/gazette/story/2007/05/opossum-genome-shows-junk-dna-source-of-genetic-innovation/

· https://www.nature.com/articles/nature05805

· http://www.sciencemag.org/news/2018/01/key-successful-pregnancy-tamed-immune-reaction

· http://www.pnas.org/content/114/32/E6566

· http://www.publish.csiro.au/rd/Fulltext/rd16519?subscribe=false

· http://darwin-online.org.uk/content/frameset?pageseq=1&itemID=A1014.2&viewtype=text

· https://books.google.com/books?id=5IqhZoTEF10C&lpg=PA332&ots=KOKB6gn_vk&dq=thanatosis%20M.%20domestica%20opossum&lr&pg=PR4#v=onepage&q&f=false

Milk:

· https://link.springer.com/chapter/10.1007/978-3-319-61569-1_13

Armadillo/Sloth

· https://books.google.com/books?id=XTUYCwAAQBAJ&pg=RA1-PA384&lpg=RA1-PA384&dq=aardvark+pangolin+anteater+sloth+phylogeny&source=bl&ots=In5mi1fSO_&sig=Mtj8gAlFddTHr-qFM-Q3EIJifKI&hl=en&sa=X&ved=2ahUKEwiKgtDdm6TeAhWNTt8KHTZ1Bz0Q6AEwFXoECAoQAQ#v=onepage&q=aardvark%20pangolin%20anteater%20sloth%20phylogeny&f=false

Sloth:

· https://www.nationalgeographic.com/animals/mammals/group/three-toed-sloths/

· https://www.ncbi.nlm.nih.gov/genome/907

· http://genome.wustl.edu/genomes/detail/choloepus-hoffmanni/

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4298209/

· https://academic.oup.com/gbe/article/8/3/607/2574116

· http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0051389

· https://books.google.com/books?id=OlrjpWBBHGUC&pg=PA50&lpg=PA50&dq=three-toed+sloth+genome&source=bl&ots=OIGyyovD7G&sig=Fp4rtu10QHtYwv1Kk3-iaWYuXsA&hl=en&sa=X&ved=0ahUKEwip-sy-za_XAhXH5IMKHZv8CoUQ6AEIdzAO#v=onepage&q=three-toed%20sloth%20genome&f=false

Swimming:

· https://www.youtube.com/watch?v=T7HGSvczDA4

Pangolin evolution:

· https://blogs.scientificamerican.com/tetrapod-zoology/surprises-from-placental-mammal-phylogeny-1-pangolins-are-close-kin-of-carnivorans/

· https://www.researchgate.net/publication/225550717_The_Phylogeny_of_Living_and_Extinct_Pangolins_Mammalia_Pholidota_and_Associated_Taxa_A_Morphology_Based_Analysis

Scutes:

· https://books.google.com/books?id=e-r5zSAx8eoC&pg=PA104&lpg=PA104&dq=armadillo+scutes+skin+keratin+bird+crocodile+turtle&source=bl&ots=bPOfPfBIHW&sig=O-zoS-st4eH_pMAYD26TdtYxvJE&hl=en&sa=X&ved=2ahUKEwjkxN-orKTeAhUKm-AKHa0QDtQ4ChDoATACegQICBAB#v=onepage&q=scutes&f=false

Circadian Rhythm in the gut:

· https://kresserinstitute.com/gut-circadian-rhythm-connection/

Sloth poop:

· https://www.sciencealert.com/this-is-the-horror-that-sloths-have-to-go-through-every-time-they-poop

· http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2001000100002

· https://twitter.com/juleslhoward/status/995019966285058048 (links to good WaPo article)

House Mouse

· http://phiferrixeylab.com/research/evolutionary-genetics-in-house-mice/

· http://www.slate.com/articles/health_and_science/the_mouse_trap/2011/11/lab_mice_are_they_limiting_our_understanding_of_human_disease_.html

· https://www.google.com/search?ei=UBtYWpu7B8yF_Qb5s7HICw&q=dba+mouse+mus+musculus&oq=dba+mouse+mus+muscu&gs_l=psy-ab.1.0.33i21k1j33i160k1l2.2175.5385.0.7670.10.10.0.0.0.0.154.1007.0j8.8.0….0…1c.1.64.psy-ab..2.7.870…0j0i22i30k1j33i22i29i30k1.0.jzFpiGp85hM

· https://lens.elifesciences.org/05959/

· (Overlap with humans, Reassembling the Tree of Life, mentioned elsewhere)

· https://www.csmonitor.com/Science/2017/0329/Mice-to-men-everywhere-you-go-we-ll-follow

· http://isciencemag.co.uk/features/rags-riches-and-rodentia-the-different-lives-of-mice/

· http://www.cell.com/trends/genetics/fulltext/S0168-9525(09)00065-1

Sex Differences

· http://blogs.biomedcentral.com/on-biology/2018/06/01/take-a-deep-breath-sex-differences-may-play-a-significant-role-in-the-onset-and-treatment-of-lung-disease/

· https://www.ossdweb.org/

· https://bsd.biomedcentral.com/articles/10.1186/s13293-017-0158-2

Neurotransmitter similarity

· https://www.researchgate.net/publication/43344857_Mice_in_Ecstasy_Advanced_Animal_Models_in_the_Study_of_MDMA

Bonobo:

· SIVirushttps://www.ncbi.nlm.nih.gov/pubmed/22837215

· https://evmedreview.com/evolution-of-the-immune-system/

· https://scholar.google.com/citations?user=gTNmlS0AAAAJ&hl=en

· Muscles Thought to Be Exclusively Human Have Just Been Found in …

· http://www.sciencemag.org/news/2012/06/bonobos-join-chimps-closest-human-relatives

Tell-tale Muscle:

· https://www.sciencealert.com/seven-human-muscles-found-in-apes-challenge-evolutionary-history

Jungle Fowl (Chicken)

· Dinosaur face experimenthttp://www.bbc.com/earth/story/20150512-bird-grows-face-of-dinosaur

· https://geogenetics.ku.dk/latest-news/alle_nyheder/2014/international-team-maps-big-bang-of-bird-evolution/Darwin

· https://www.sciencedirect.com/science/article/pii/S0960982215009458

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4289940/

· http://www.ozy.com/flashback/john-edmonstone-the-freed-slave-who-inspired-charles-darwin/31600

· https://www.bbc.com/timelines/zsdtp39

· https://books.google.com/books?id=CNXypPbj1PoC&pg=PA190&lpg=PA190&dq=darwin+%22d.+melanogaster%22&source=bl&ots=SjDeehV9BI&sig=YNxhhRt4bDEjGwqTpGLHML0gxNI&hl=en&sa=X&ved=0ahUKEwjMyerUjezYAhVGRqwKHRa9DCAQ6AEIVDAF#v=onepage&q=%22d.%20melanogaster%22&f=false

· https://books.google.com/books?id=sElrZSzoLYMC&pg=PA168&lpg=PA168&dq=darwin+%22d.+melanogaster%22&source=bl&ots=eO22lhMKm4&sig=PWuKvvdxZogHKK0LY1isCJAYgWw&hl=en&sa=X&ved=0ahUKEwi4mJLf4OrYAhUPOawKHbRsD6IQ6AEIPDAC#v=onepage&q=only%20after%20detailed%20exmination&f=false

Gharial

· www.crocgenomes.org/

· http://crocgenome.hpc.msstate.edu/crocbase/gene.php

· https://www.nature.com/articles/nature12336

· https://www.amnh.org/shelf-life/episode-16-tales-from-the-cryptic-species?utm_source=Twitter

· https://link.springer.com/article/10.1007/s00239-004-0336-9

· https://www.sciencedirect.com/science/article/pii/S1055790311001692

· As related to birds/archosaurs

· https://genomebiology.biomedcentral.com/articles/10.1186/gb-2012-13-1-415

· https://academic.oup.com/gbe/article/7/1/205/599226

· https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0114631

· Common ancestor crocs birds with bit about speed of evo http://news.ucsc.edu/2014/12/crocodile-genomes.html

Barn Owl

· https://www.ncbi.nlm.nih.gov/pubmed/23615168

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3942033/

· https://www.ncbi.nlm.nih.gov/bioproject/PRJNA212909

· https://www.ncbi.nlm.nih.gov/genome/31927?genome_assembly_id=59169

· https://academic.oup.com/gbe/article/9/10/2522/4091607

· https://www.barnowltrust.org.uk/barn-owl-facts/barn-owl-adaptations/

· http://novataxa.blogspot.com/2018/05/tyto.html

· (Extra)https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0080112

· https://www.carolina.com/teacher-resources/Interactive/galapagos-mystery-solved-with-barn-owl-pellets/tr11097.tr

Velvet Spider

· https://www.nature.com/articles/ncomms4765,http://www.sciencemag.org/news/2017/10/spider-genes-put-new-spin-arachnids-potent-venoms-stunning-silks-and-surprising-history

· https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-017-0399-x

· https://peerj.com/articles/1719/?utm_source=TrendMD&utm_campaign=PeerJ_TrendMD_1&utm_medium=TrendMD

· https://www.nytimes.com/2018/04/26/science/spider-web-evolution.html

· https://www.sciencedaily.com/releases/2014/05/140507105031.htm

Eyes:https://splice-bio.com/research-spider-eyes-help-solve-macular-degeneration/

EvoDevo:https://mcgregor-evo-devo-lab.net/McGregor_lab/Spider_Evo_Devo.html

(Very cool, left out:https://www.theatlantic.com/science/archive/2018/07/the-electric-flight-of-spiders/564437/

Kiwi

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4511969/, andhttps://genomebiology.biomedcentral.com/articles/10.1186/s13059-015-0711-4

· http://science.sciencemag.org/content/344/6186/898

· https://www.tandfonline.com/doi/abs/10.1080/03014223.2017.1376690

· https://www.audubon.org/news/why-kiwis-egg-so-big

Tortoise

· https://www.sciencedaily.com/releases/2013/04/130428144848.htm

· https://genomebiology.biomedcentral.com/articles/10.1186/gb-2013-14-3-r28

· Turtles as Hopeful Monsters by Olivier Rieppelhttps://books.google.com/books?id=8rXIDQAAQBAJ&printsec=frontcover&dq=turtles+as+hopeful+monsters&hl=en&sa=X&ved=0ahUKEwjSyIre18bZAhVG9IMKHajMAM0Q6AEIKTAA#v=onepage&q=turtles%20as%20hopeful%20monsters&f=false

· https://www.nature.com/news/2010/100217/full/463864a.html

· https://www.genome.wustl.edu/articles/detail/decoding-the-turtle-genome/

· http://danieljfield.com/Home/Publications_files/Field%20et%20al.%202014%20Toward%20consilience%20in%20reptile%20phylogeny%3A%20miRNAs%20support%20an%20archosaur,%20not%20lepidosaur,%20affinity%20for%20turtle.pdf

· https://www.nature.com/articles/ng.2615

Little Brown Bat

· https://phys.org/news/2012-12-genome-insights-evolution-flight-immunity.html

· https://www.broadinstitute.org/brown-bat/little-brown-bat-genome-project

· www.sciencedirect.com/topics/neuroscience/little-brown-bat

· http://genomics.senescence.info/species/entry.php?species=Myotis_lucifugus

· https://www.researchgate.net/figure/Phylogenetic-relationships-and-divergence-times-in-bats-and-mammalian-species-The_fig1_318711616

· www.ensembl.org/Myotis_lucifugus/Info/Annotation

· https://www.nature.com/articles/ncomms3212

· https://www.nature.com/articles/srep27726

· http://www.pnas.org/content/103/41/15103

· http://www.pnas.org/content/103/17/6581

Disease Resistance:

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754046/

· https://www.wired.com/2014/10/bats-ebola-disease-reservoir-hosts/

· https://www.washingtonpost.com/national/health-science/little-brown-bats-found-that-appear-to-resist-disease-that-has-devastated-species/2011/12/21/gIQAwJD99O_story.html?noredirect=on&utm_term=.2c593da190d8

Limb Development as related to humans:

https://www.genome.gov/pages/research/sequencing/baclibrary/brownbatbac.pdf

Echolocation:

· https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0000900

· https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0085279

· https://www.nationalgeographic.com/science/phenomena/2014/11/07/bats-jam-each-others-sonar/?user.testname=photogallery:c

· https://www.sciencedaily.com/releases/2015/07/150707134625.htm

On genome size:

· http://www.pnas.org/content/114/8/E1460

· https://www.wired.com/story/shrinking-bat-genomes-spark-a-new-model-of-evolution/

Axolotl

· https://www.cell.com/cell-reports/fulltext/S2211-1247(16)31770-3,https://www.ncbi.nlm.nih.gov/pubmed/28099853

· https://www.nature.com/articles/s41536-017-0034-z

· http://www.pnas.org/content/109/34/13662

Regeneration:

· https://www.quantamagazine.org/axolotl-genome-slowly-yields-secrets-of-limb-regrowth-20180702/

· http://crosstalk.cell.com/blog/meet-jessica-whited-axolotl-expert-and-actual-living-scientist

· https://www.pbs.org/wgbh/nova/article/saving-axolotls/

Gills and development:

· https://evolution.berkeley.edu/evolibrary/article/history_25

Hips and Pelvis:

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3651358/

· https://evodevojournal.biomedcentral.com/articles/10.1186/2041-9139-4-3

General:

· https://books.google.com/books?id=hr_gdvIU8wEC&pg=PA62&lpg=PA62&dq=axolotl+triploid+diploid+pentaploid&source=bl&ots=6C8agZGBom&sig=XnusJNKjJtGxzHX-c-EuhRl4G9Y&hl=en&sa=X&ved=0ahUKEwirl-2–PjXAhWkY98KHe7XDR8Q6AEIKTAA#v=onepage&q=axolotl%20triploid%20diploid%20pentaploid&f=false

· https://www.nationalgeographic.com/animals/amphibians/a/axolotl/

· https://www.caudata.org/cc/species/Ambystoma/A_mexicanum.shtml

Naked Mole Rat

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4253829/

· https://www.livescience.com/20647-favorite-genome-sequence-studies.html

· https://www.livescience.com/4026-lazy-mole-rats-serve-queen.html

· https://www.livescience.com/16516-naked-mole-rat-genome-longevity.html

Honey Bee

· https://www.nature.com/collections/ynktpsmfhg

· Central complexhttps://www.ncbi.nlm.nih.gov/pubmed/24160424

· https://www.thenakedscientists.com/articles/questions/how-did-waggle-dance-evolve

· https://www.ncbi.nlm.nih.gov/pubmed/17123837

· https://academic.oup.com/jhered/article/93/3/170/2187244

· http://jeb.biologists.org/content/220/23/4339

Elephant/Mammoth

· http://www.pnas.org/content/early/2018/02/16/1720554115

· https://www.sciencedaily.com/releases/2015/07/150702131757.htm

· http://www.birds.cornell.edu/brp/elephant/cyclotis/evolution.html

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737375/

· https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006601

· https://www.nature.com/news/mammoth-genomes-provide-recipe-for-creating-arctic-elephants-1.17462

· Split from armadillo sloth line:http://www.pnas.org/content/98/1/1

· Anti-cancer mutations https://www.sciencedirect.com/science/article/pii/S2211124718311458

· (Extinction from humans: Inheritors of the Earth, Thomas)

Jungle Fowl (Chicken)

· Dinosaur face experimenthttp://www.bbc.com/earth/story/20150512-bird-grows-face-of-dinosaur

· https://geogenetics.ku.dk/latest-news/alle_nyheder/2014/international-team-maps-big-bang-of-bird-evolution/Darwin

· https://www.sciencedirect.com/science/article/pii/S0960982215009458

· https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4289940/

· http://www.ozy.com/flashback/john-edmonstone-the-freed-slave-who-inspired-charles-darwin/31600

· https://www.bbc.com/timelines/zsdtp39

Tardigrade

· https://www.the-scientist.com/daily-news/genomic-analysis-leaves-tardigrade-phylogeny-unclear-31164

· https://onlinelibrary.wiley.com/doi/full/10.1111/zoj.12435

· http://www.pnas.org/content/early/2016/04/14/1603862113.short

· https://www.sciencedirect.com/science/article/pii/S0011224015300134

· https://www.nature.com/articles/ncomms12808

· https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-10-469

· http://www.pnas.org/content/113/22/E3054.short

· http://www.pnas.org/content/pnas/early/2016/03/23/1600338113.full.pdf

Horizontal Gene Transfer:

· https://www.economist.com/news/science-and-technology/21646197-human-beings-ancestors-have-routinely-stolen-genes-other-species-genetically

· (Tangled Tree book, mentioned elsewhere)

Octopus

· Other Minds: The Octopus and the Evolution of Intelligent Life by Peter Godfrey-Smith

vet and reorder

· Squid Empire: The Rise and the Fall of the Cephalopods by Danna Staaf

· http://blogs.plos.org/dnascience/2017/04/06/octopuses-squid-and-cuttlefish-rna-editing-instead-of-genome-evolution/

· Soul of an Octopus by Sy Montgomery

· Octopus! book

· Intro to Genomics, 2017https://books.google.com/books?id=3fZ0DgAAQBAJ&pg=PA127&lpg=PA127&dq=california+two+spotted+octopus+base+pairs+total+number&source=bl&ots=dpWkUH0FhZ&sig=EqPtYfD2CyuZzJlDxhiZgwa0ntQ&hl=en&sa=X&ved=0ahUKEwjPh6Gh8Y_ZAhVJ4YMKHUFGDy8Q6AEISTAE#v=onepage&q=california%20two%20spotted%20octopus%20base%20pairs%20total%20number&f=false

· In Journal of Researches pp. 6–7: “I was interested, on several occasions”

· https://sciencelife.uchospitals.edu/2013/01/21/sequencing-the-genome-of-the-oceans-weirdest-creatures/

· https://phys.org/news/2017-04-smart-cephalopods-genome-evolution-prolific.html

· http://nautil.us/blog/what-it-feels-like-to-be-an-octopus

http://www.sciencemag.org/news/2015/08/octopus-genome-surprises-and-teases

· https://www.nature.com/news/octopus-genome-holds-clues-to-uncanny-intelligence-1.18177

· The Octopus Genome: Not “Alien” but Still a Big Problem for .https://evolutionnews.org/2015/08/the_octopus_gen/

http://metazoa.ensembl.org/Octopus_bimaculoides/Info/Index

See with skin (Montgomery Page 50)

· RNAhttps://groups.oist.jp/molgenu/octopus-genome

· Compress tap shrimp thing, needs fact check:http://blog.kusinicollection.com/2017/03/the-octopuss-garden.html

· https://link.springer.com/article/10.1007/s10164-017-0519-7

· https://news.nationalgeographic.com/news/2009/02/090227-octopus-mischief.html

· Darwin Onlin:http://darwin-online.org.uk/content/search-results?freetext=octopus

· www.sciencemag.org/news/2015/08/octopus-genome-surprises-and-teases

· (deeper than)https://www.theatlantic.com/science/archive/2017/04/octopuses-do…to…/522024/

· https://www.scientificamerican.com/…/octopus-genome-reveals-secrets-to-comple…

· https://www.ncbi.nlm.nih.gov/pubmed/26268193 CB Albertin – ‎2015 – ‎Cited by 135

· Landmark sequencing of octopus genome shows basis for intelligence …

· Nature. 2015 Aug 13;524(7564):220-4. doi: 10.1038/nature14668. The octopus genome and the evolution of cephalopod neural and morphological novelties

https://news.uchicago.edu/…/landmark-sequencing-octopus-genome-shows-basis-intel